usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 45.6613333333333 20.36625 52.4170833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 578
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 349
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 349
Number of spheres polar: 97, nonpolar: 134, out of current total: 349
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.80186 55.54820 10.61119 29.96246 42.47094 62.24689
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 210
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 184
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 154
Spheres center of coords (x y z): 47.5655525974026 24.4919528571429 50.4338796753246
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.64354408229962
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 12