usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 42.1789411764706 -2.00041176470588 28.7198235294118
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 786
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 538
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 534
Number of spheres polar: 270, nonpolar: 137, out of current total: 534
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.18305 52.12359 -11.99365 7.94000 18.74200 38.68237
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 279
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 237
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 198
Spheres center of coords (x y z): 42.0783572727273 -1.90032227272727 31.2835008585859
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.16416190121476
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 17