usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 28.987 12.7989473684211 19.5388421052632
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 702
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 485
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 482
Number of spheres polar: 151, nonpolar: 183, out of current total: 482
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.13215 38.56670 4.35224 22.79251 9.69350 29.53434
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 201
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 161
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 143
Spheres center of coords (x y z): 31.4627145454545 10.4915023776224 22.7535108391608
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.94493290544904
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 15
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 19