usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): -2.96439393939394 5.00587878787879 23.3665454545455
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1044
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 605
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 594
Number of spheres polar: 217, nonpolar: 212, out of current total: 594
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.78631 6.97907 -4.93200 14.89339 13.74158 33.35955
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 226
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 181
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 163
Spheres center of coords (x y z): -3.64854748466258 3.09061282208589 22.5435624539877
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.85516441338248
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 33