There are 25 ligand heavy atoms Ligand center of coords (x y z): 43.61584 -1.0292 31.09 useligsph not on Starting number of spheres from sph/sph cluster 0: 733 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 569 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 561 Number of spheres polar: 211, nonpolar: 187, out of current total: 561 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 31.66223 55.58919 -13.01127 10.94383 19.09505 43.02801 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 252 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 189 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 43.61584 -1.0292 31.09 Center point: 125 xyz: 43.28616 -1.87007 31.49386 After continuity checking, number of spheres is: 154 Spheres center of coords (x y z): 44.630561038961 -1.42558175324675 35.0124225974026 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 47.8472523787947 6.83279474399639 25.5473701857725 Average weighted-distance for final elimination is: 32.2305277619152 Final number of output spheres is: 120 Number of polar spheres: 39 Number of nonpolar spheres: 36 Number of spheres that are near neither polar nor nonpolar receptor atoms: 45 Final number of spheres that are from crystallographic ligand: 0