usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 54.5707352941176 56.0215882352941 80.6550882352941
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 729
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 426
WARNING: removing a crystallographic sphere that is distance 7.11116425066951 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 419
Number of spheres polar: 138, nonpolar: 144, out of current total: 419
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 44.82515 60.01270 46.04063 65.97408 70.76494 89.09167
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 188
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 168
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 153
Spheres center of coords (x y z): 53.3709220915033 57.7006968627451 80.9049833986928
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.68884898418493
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 33