usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 25.4445555555556 43.6742222222222 16.5874444444444
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 672
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 463
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 463
Number of spheres polar: 235, nonpolar: 139, out of current total: 463
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.46282 34.59066 34.23714 53.43468 6.80648 26.52792
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 148
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 113
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 83
Spheres center of coords (x y z): 23.8333172289157 47.8729969879518 19.2970257831325
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.95245578861861
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 14
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 9