There are 8 ligand heavy atoms Ligand center of coords (x y z): 29.265875 14.576375 17.365875 useligsph not on Starting number of spheres from sph/sph cluster 0: 774 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 636 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 634 Number of spheres polar: 263, nonpolar: 232, out of current total: 634 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.31977 41.14498 5.34505 26.35607 5.78900 29.36084 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 238 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 179 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 29.265875 14.576375 17.365875 Center point: 86 xyz: 29.01465 14.81839 17.67080 After continuity checking, number of spheres is: 155 Spheres center of coords (x y z): 31.0059758064516 10.6686161935484 18.5341723870968 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 25.1531440981093 21.4743811957077 23.2158201328563 Average weighted-distance for final elimination is: 32.3789056366703 Final number of output spheres is: 120 Number of polar spheres: 41 Number of nonpolar spheres: 31 Number of spheres that are near neither polar nor nonpolar receptor atoms: 48 Final number of spheres that are from crystallographic ligand: 0