usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 29.4023333333333 14.5565555555556 16.3623333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 742
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 474
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 472
Number of spheres polar: 204, nonpolar: 156, out of current total: 472
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.43581 39.38199 4.67651 23.78683 6.42784 26.20352
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 174
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 140
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 112
Spheres center of coords (x y z): 31.1319489285714 10.7862310714286 16.778219375
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.48511913911535
Final number of output spheres is: 45
Number of polar spheres: 18
Number of nonpolar spheres: 10
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 9