usefragsph not on
There are 10 ligand heavy atoms
Ligand center of coords (x y z): 29.1134 14.4619 17.2517
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 759
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 490
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 488
Number of spheres polar: 209, nonpolar: 166, out of current total: 488
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.32508 39.06108 5.29922 23.52733 7.25242 27.20057
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 263
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 213
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 172
Spheres center of coords (x y z): 31.3028747674419 11.306695 17.4377295348837
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.79733937381145
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 10