usefragsph not on
There are 53 ligand heavy atoms
Ligand center of coords (x y z): 91.2384339622641 -11.4139811320755 56.8282830188679
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1098
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 553
WARNING: removing a crystallographic sphere that is distance 7.33694629938096 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 8.4310486299155 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.78103135837403 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.88711594944565 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 548
Number of spheres polar: 181, nonpolar: 203, out of current total: 548
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 81.28100 101.07770 -21.16448 -1.58719 46.82981 65.89388
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 331
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 295
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 275
Spheres center of coords (x y z): 90.5637562181819 -10.9166451636364 57.2379664
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.93167464530221
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 49