usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 53.1638888888889 67.4842222222222 -29.115
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 765
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 500
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 500
Number of spheres polar: 215, nonpolar: 167, out of current total: 500
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 43.16442 62.94880 58.61735 77.01575 -39.10450 -19.22300
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 253
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 211
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 160
Spheres center of coords (x y z): 54.80411325 71.738724625 -30.611937
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.90042994309376
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 9