There are 28 ligand heavy atoms Ligand center of coords (x y z): 42.3185 23.2120714285714 53.8872857142857 useligsph not on Starting number of spheres from sph/sph cluster 0: 1131 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 867 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 864 Number of spheres polar: 406, nonpolar: 257, out of current total: 864 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.35992 54.27413 11.24928 31.99764 41.90221 65.20153 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 284 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 223 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 42.3185 23.2120714285714 53.8872857142857 Center point: 185 xyz: 41.96141 23.92418 54.86611 After continuity checking, number of spheres is: 176 Spheres center of coords (x y z): 44.1505827272727 24.86682125 52.9067396022727 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 40.9826754932503 14.6261599169263 45.7479470404984 Average weighted-distance for final elimination is: 31.06243589286 Final number of output spheres is: 120 Number of polar spheres: 52 Number of nonpolar spheres: 28 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0