usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 53.3011111111111 67.156 -29.0811111111111
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 941
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 628
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 628
Number of spheres polar: 253, nonpolar: 224, out of current total: 628
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 43.37626 63.21820 58.28681 77.11160 -39.06160 -19.08207
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 193
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 156
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 110
Spheres center of coords (x y z): 54.9605811818182 71.8713502727273 -30.9991043636364
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.52434991509972
Final number of output spheres is: 45
Number of polar spheres: 18
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 9