There are 12 ligand heavy atoms Ligand center of coords (x y z): 28.8503333333333 14.5188333333333 17.1735 useligsph not on Starting number of spheres from sph/sph cluster 0: 739 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 625 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 625 Number of spheres polar: 333, nonpolar: 176, out of current total: 625 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.16284 40.82214 5.89327 23.88622 5.82385 29.11207 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 210 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 148 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 28.8503333333333 14.5188333333333 17.1735 Center point: 103 xyz: 28.62642 14.96200 18.07654 After continuity checking, number of spheres is: 94 Final number of output spheres is: 94 Number of polar spheres: 27 Number of nonpolar spheres: 26 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0