usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 28.8503333333333 14.5188333333333 17.1735
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 739
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 528
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 528
Number of spheres polar: 297, nonpolar: 128, out of current total: 528
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.09086 38.82114 5.89327 23.88622 7.22287 27.13748
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 184
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 127
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 81
Spheres center of coords (x y z): 27.9972766666667 11.4850014814815 20.1829183950617
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.49677458594107
Final number of output spheres is: 45
Number of polar spheres: 31
Number of nonpolar spheres: 6
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 12