usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 28.8947777777778 14.3665555555556 16.7463333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 588
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 398
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 398
Number of spheres polar: 206, nonpolar: 116, out of current total: 398
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.76564 38.85662 4.96907 22.85384 6.77883 26.51810
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 184
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 156
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 107
Spheres center of coords (x y z): 27.6059852336449 17.4369126168224 14.3669230841122
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.63719209827415
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 9