There are 9 ligand heavy atoms Ligand center of coords (x y z): 28.8802222222222 14.7334444444444 16.668 useligsph not on Starting number of spheres from sph/sph cluster 0: 660 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 532 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 531 Number of spheres polar: 263, nonpolar: 156, out of current total: 531 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.29194 40.78726 5.64963 26.62418 4.70330 28.66580 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 177 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 139 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 28.8802222222222 14.7334444444444 16.668 Center point: 74 xyz: 29.09390 14.48083 16.60183 After continuity checking, number of spheres is: 94 Final number of output spheres is: 94 Number of polar spheres: 35 Number of nonpolar spheres: 24 Number of spheres that are near neither polar nor nonpolar receptor atoms: 35 Final number of spheres that are from crystallographic ligand: 0