usefragsph not on
There are 8 ligand heavy atoms
Ligand center of coords (x y z): -0.788875 45.943625 14.27175
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 203
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 166
WARNING: removing a crystallographic sphere that is distance 1.02856696427603 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 165
Number of spheres polar: 80, nonpolar: 46, out of current total: 165
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.08059 9.12188 43.90175 55.70728 4.36479 21.79162
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 108
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 95
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 61
Spheres center of coords (x y z): -0.650331475409836 47.1614703278689 12.8608042622951
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.04379038256839
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 23
Final number of spheres that are from crystallographic ligand: 7