usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): -2.63626315789474 49.6989473684211 2.04805263157895
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 901
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 563
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 561
Number of spheres polar: 194, nonpolar: 213, out of current total: 561
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.62724 7.32703 39.71320 59.48892 -7.79064 12.04316
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 313
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 266
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 183
Spheres center of coords (x y z): -2.60139109289617 52.8074872131148 4.07764519125683
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.99151323029791
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 19