There are 9 ligand heavy atoms Ligand center of coords (x y z): -1.763 14.4916666666667 -16.8727777777778 useligsph not on Starting number of spheres from sph/sph cluster 0: 708 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 582 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 582 Number of spheres polar: 309, nonpolar: 165, out of current total: 582 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.75093 9.72829 3.26666 23.84471 -28.87071 -4.91671 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 182 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 141 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -1.763 14.4916666666667 -16.8727777777778 Center point: 104 xyz: -1.60177 13.80375 -16.66487 After continuity checking, number of spheres is: 70 Final number of output spheres is: 70 Number of polar spheres: 23 Number of nonpolar spheres: 14 Number of spheres that are near neither polar nor nonpolar receptor atoms: 33 Final number of spheres that are from crystallographic ligand: 0