There are 20 ligand heavy atoms Ligand center of coords (x y z): -2.0408 -17.85235 14.11555 useligsph not on Starting number of spheres from sph/sph cluster 0: 777 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 606 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 601 Number of spheres polar: 243, nonpolar: 176, out of current total: 601 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.01336 9.18877 -25.45619 -5.90153 2.12804 26.08848 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 234 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 188 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.0408 -17.85235 14.11555 Center point: 153 xyz: -1.18748 -18.46700 14.90630 After continuity checking, number of spheres is: 157 Spheres center of coords (x y z): -4.9025927388535 -18.3895042675159 10.9509818471338 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 2.19682334710744 -7.84263378099172 10.6397303719008 Average weighted-distance for final elimination is: 31.258170445769 Final number of output spheres is: 120 Number of polar spheres: 35 Number of nonpolar spheres: 33 Number of spheres that are near neither polar nor nonpolar receptor atoms: 52 Final number of spheres that are from crystallographic ligand: 0