usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -2.0408 -17.85235 14.11555
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 777
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 503
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 500
Number of spheres polar: 181, nonpolar: 160, out of current total: 500
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.82267 7.17722 -25.45619 -8.46095 4.12007 24.09573
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 189
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 160
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 145
Spheres center of coords (x y z): -3.55994151724138 -19.0508534482759 11.1910911724138
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.12841809651892
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 15
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 20