There are 9 ligand heavy atoms Ligand center of coords (x y z): 28.9493333333333 14.83 16.4338888888889 useligsph not on Starting number of spheres from sph/sph cluster 0: 599 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 474 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 466 Number of spheres polar: 198, nonpolar: 168, out of current total: 466 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 16.98004 40.86695 5.83833 25.28382 6.67093 28.41978 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 168 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 134 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 28.9493333333333 14.83 16.4338888888889 Center point: 67 xyz: 28.65357 15.00225 17.22349 After continuity checking, number of spheres is: 87 Final number of output spheres is: 87 Number of polar spheres: 35 Number of nonpolar spheres: 21 Number of spheres that are near neither polar nor nonpolar receptor atoms: 31 Final number of spheres that are from crystallographic ligand: 0