There are 7 ligand heavy atoms Ligand center of coords (x y z): 24.8627142857143 24.9874285714286 -2.71328571428571 useligsph not on Starting number of spheres from sph/sph cluster 0: 655 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 562 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 558 Number of spheres polar: 221, nonpolar: 175, out of current total: 558 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 12.88560 35.52635 13.11603 36.81656 -11.57802 9.27483 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 217 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 151 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 24.8627142857143 24.9874285714286 -2.71328571428571 Center point: 112 xyz: 25.61701 24.87697 -2.37369 After continuity checking, number of spheres is: 109 Final number of output spheres is: 109 Number of polar spheres: 32 Number of nonpolar spheres: 33 Number of spheres that are near neither polar nor nonpolar receptor atoms: 44 Final number of spheres that are from crystallographic ligand: 0