Distance from surface specified: 1.80 There are 26 ligand heavy atoms Ligand center of coords (x y z): 25.3810769230769 76.9123461538462 83.6137307692308 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12236 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 9823 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 9376 Number of spheres polar: 6673, nonpolar: 2017, out of current total: 9376 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 11.43380 39.37020 62.91400 90.89840 69.62860 97.59980 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1121 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 620 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 553 Spheres center of coords (x y z): 27.9812238698011 80.2765880650995 83.1046607594937 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.78971463751 Final number of output spheres is: 200 Number of polar spheres: 123 Number of nonpolar spheres: 66 Number of spheres that are near neither polar nor nonpolar receptor atoms: 11 Final number of spheres that are from crystallographic ligand: 26