usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 15.40315 47.19595 -53.66325
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1321
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 919
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 919
Number of spheres polar: 259, nonpolar: 380, out of current total: 919
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.44286 25.26467 37.81800 57.10873 -63.57638 -43.66396
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 514
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 450
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 440
Spheres center of coords (x y z): 17.3879119772727 49.4064047045454 -52.2479202727273
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.58751803396797
Final number of output spheres is: 60
Number of polar spheres: 27
Number of nonpolar spheres: 15
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 20