usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 15.3592 49.1423 -56.0675
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1128
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 784
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 782
Number of spheres polar: 217, nonpolar: 240, out of current total: 782
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.87709 25.15436 39.63300 59.12909 -66.03793 -46.09767
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 469
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 414
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 380
Spheres center of coords (x y z): 17.6246495263158 50.9162268947369 -54.5581006052631
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.43411170368417
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 13
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 20