usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 14.2474848484849 14.528 34.9192424242424
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1441
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 737
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 737
Number of spheres polar: 234, nonpolar: 317, out of current total: 737
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.30329 24.04636 4.53874 23.87984 25.07719 44.89878
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 243
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 204
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 194
Spheres center of coords (x y z): 12.8217546907217 11.7563203092783 36.980575
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.41669292126907
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 33