usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 15.2366551724138 14.0453448275862 34.7083448275862
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1464
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 936
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 936
Number of spheres polar: 355, nonpolar: 373, out of current total: 936
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.24663 24.23778 4.08542 23.70980 24.72087 44.67362
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 507
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 435
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 429
Spheres center of coords (x y z): 13.0252937529138 14.2041946620047 35.0884214452214
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.48260032900308
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 29