usefragsph not on
There are 49 ligand heavy atoms
Ligand center of coords (x y z): 13.6390612244898 10.2937755102041 37.5037755102041
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1303
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 810
WARNING: removing a crystallographic sphere that is distance 7.16578544194564 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.84620334939135 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 807
Number of spheres polar: 210, nonpolar: 362, out of current total: 807
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.29509 23.56816 -0.26600 20.26958 28.54244 47.48170
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 294
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 239
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 47
Spheres center of coords (x y z): 13.7665319148936 10.7598085106383 37.1719574468085
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.7202162676749
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 3
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 45