There are 13 ligand heavy atoms Ligand center of coords (x y z): 8.70146153846154 1.94846153846154 25.3113846153846 useligsph not on Starting number of spheres from sph/sph cluster 0: 567 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 472 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 457 Number of spheres polar: 173, nonpolar: 176, out of current total: 457 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.19724 20.63356 -9.91816 13.72057 13.60584 37.29820 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 191 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 156 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 8.70146153846154 1.94846153846154 25.3113846153846 Center point: 112 xyz: 8.59350 2.32639 25.41581 After continuity checking, number of spheres is: 106 Final number of output spheres is: 106 Number of polar spheres: 37 Number of nonpolar spheres: 30 Number of spheres that are near neither polar nor nonpolar receptor atoms: 39 Final number of spheres that are from crystallographic ligand: 0