usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 8.70146153846154 1.94846153846154 25.3113846153846
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 567
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 329
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 325
Number of spheres polar: 98, nonpolar: 154, out of current total: 325
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.21632 17.70645 -7.95621 11.88693 16.41965 35.24039
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 206
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 170
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 142
Spheres center of coords (x y z): 8.39476225352113 5.90336338028169 25.7789645070423
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.39367365626419
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 13