usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 8.62630769230769 1.91392307692308 25.3265384615385
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 520
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 341
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 337
Number of spheres polar: 101, nonpolar: 162, out of current total: 337
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.21063 18.14161 -7.30346 11.89576 16.28789 35.31978
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 184
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 160
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 131
Spheres center of coords (x y z): 8.27489213740458 5.31030435114504 26.1825439694656
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.3915872894407
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 13