usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 31.3865555555556 5.39233333333333 28.2374444444444
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 793
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 519
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 515
Number of spheres polar: 236, nonpolar: 136, out of current total: 515
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.39492 41.37944 -3.03660 15.38601 18.24721 38.19146
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 278
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 223
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 184
Spheres center of coords (x y z): 30.4990540217391 10.0855329347826 26.0704958152174
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.47114761614807
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 9