usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 31.8068888888889 16.8695555555556 -10.74
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 745
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 441
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 440
Number of spheres polar: 180, nonpolar: 137, out of current total: 440
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.81265 41.25106 6.89289 26.74733 -20.73799 -2.20269
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 241
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 209
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 185
Spheres center of coords (x y z): 28.8963827567567 16.0207857297297 -13.8092990810811
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.66998131768655
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 9