usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 0.974461538461539 35.6062307692308 16.0230512820513
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2040
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1016
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1016
Number of spheres polar: 248, nonpolar: 450, out of current total: 1016
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.01398 10.95695 25.62059 45.58572 7.79903 25.97301
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 367
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 306
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 285
Spheres center of coords (x y z): -2.75176470175439 36.1647661403509 18.57524
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.47525078703093
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 39