usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 3.81554838709677 54.1141290322581 26.4779677419355
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1270
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 774
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 770
Number of spheres polar: 185, nonpolar: 403, out of current total: 770
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.18321 13.78617 44.42419 63.51791 16.48603 36.47020
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 272
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 234
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 206
Spheres center of coords (x y z): 2.18476082524272 52.727921407767 24.0578438834951
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.41707858666418
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 31