usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 4.23507142857143 54.4814642857143 26.2721071428571
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1236
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 733
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 731
Number of spheres polar: 180, nonpolar: 380, out of current total: 731
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.76437 14.22537 44.63912 64.37873 16.29343 36.25434
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 263
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 223
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 208
Spheres center of coords (x y z): 3.52015942307692 53.3942937019231 23.7513940865385
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.43097267944171
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 28