usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 3.63256 54.36976 27.14012
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1347
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 836
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 836
Number of spheres polar: 316, nonpolar: 346, out of current total: 836
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.35608 13.63098 44.72400 63.96160 17.14520 36.32940
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 446
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 393
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 368
Spheres center of coords (x y z): 1.65824054347826 53.0533050543478 25.186270951087
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.2311594247321
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 25