There are 32 ligand heavy atoms Ligand center of coords (x y z): -12.878375 -19.50784375 -6.9888125 useligsph not on Starting number of spheres from sph/sph cluster 0: 989 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 796 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 779 Number of spheres polar: 264, nonpolar: 278, out of current total: 779 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -24.76632 -0.99084 -31.25876 -11.29328 -18.01512 4.99608 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 273 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 229 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -12.878375 -19.50784375 -6.9888125 Center point: 118 xyz: -12.44195 -19.69096 -7.44457 After continuity checking, number of spheres is: 210 Spheres center of coords (x y z): -13.6649638095238 -20.534974 -8.04772090476191 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -17.3492325141777 -28.7080897920605 -4.12631285444235 Average weighted-distance for final elimination is: 31.1590071904464 Final number of output spheres is: 120 Number of polar spheres: 56 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 29 Final number of spheres that are from crystallographic ligand: 0