usefragsph not on
There are 5 ligand heavy atoms
Ligand center of coords (x y z): 17.4784 21.0644 33.332
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 281
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 264
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 264
Number of spheres polar: 109, nonpolar: 99, out of current total: 264
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.53995 26.59867 11.62769 30.55823 23.36929 36.06232
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 108
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 86
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 62
Spheres center of coords (x y z): 13.7593562903226 24.975885483871 29.6161512903226
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 8.46693972528897
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 12
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 5