usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): 9.37894594594595 11.7009459459459 -21.9868378378378
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 609
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 398
WARNING: removing a crystallographic sphere that is distance 7.92222550802487 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.68774622369911 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 396
Number of spheres polar: 121, nonpolar: 149, out of current total: 396
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.50872 19.33775 2.71194 21.70013 -28.47584 -12.04006
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 176
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 142
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 122
Spheres center of coords (x y z): 9.20088073770492 11.7025768852459 -20.2788663114754
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.77330501221818
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 35