usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): 9.37894594594595 11.7009459459459 -21.9868378378378
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 609
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 398
WARNING: removing a crystallographic sphere that is distance 8.07861101922849 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.58633620399202 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 395
Number of spheres polar: 124, nonpolar: 147, out of current total: 395
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.50872 19.33775 2.71193 21.70013 -28.47584 -12.04006
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 254
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 232
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 202
Spheres center of coords (x y z): 9.05844158415842 12.0650228712871 -20.3119633663366
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.66224172874847
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 35