usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): -26.9873846153846 -1.6315 1.62134615384615
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1640
FINISHED READING IN FILE sph/sph CLUSTER 0
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 803
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 803
Number of spheres polar: 355, nonpolar: 354, out of current total: 803
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -36.93992 -16.98880 -11.55781 8.23864 -8.25776 11.55151
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 226
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 181
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 155
Spheres center of coords (x y z): -27.8859832258065 -6.27721309677419 0.57327064516129
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.04857285119866
Final number of output spheres is: 45
Number of polar spheres: 24
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 26