DUD•EA Database of Useful Decoys: Enhanced

Home
Targets
Subsets
Generate
Other
FAQ
Revisions
Thanks

AMPC — Beta-lactamase (Other Enzymes)

Raw	Clustered	Exp.	Decoys	AUC	Log AUC	Enrichment
48	48	84	2,850	78.92	15.92	8.3

Downloads

ampc.tar.gz

Browse ampc/docking_auto/decoys_ampc_clustered/database_link

For an explanation of what these files are, please see the DUDE wiki page.

..
dbgen
properties
search
dbgen_dec_0002.db.gz
dbgen_dec_0003.db.gz
dbgen_lig_0001.db.gz
dudgen.log
ligands.charge
ligands.name
subset_decoys.py

DUD•E free to use and is provided by the Irwin and Shoichet Laboratories at UCSF.

To cite DUD•E, please reference Mysinger MM, Carchia M, Irwin JJ, Shoichet BK J. Med. Chem., 2012, Jul 5. doi 10.1021/jm300687e .

You may also wish to cite the original version of DUD, Huang, Shoichet and Irwin,J. Med. Chem., 2006, 49(23), 6789-6801. doi 10.1021/jm0608356.

send us comments and questions
This is not an official UCSF website. The opinions or statements expressed herein should not be taken as a position of or endorsement by the University of California, San Francisco.
Copyright 2009-2024 The Irwin Lab and the UC Regents